CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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1691_Multiple
(
Saccharomyces mikatae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
1691_Multiple
T051977_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RTG3
M01518_2.00
Saccharomyces cerevisiae
NKCACGTGANNN
NNNTCACGTGMN
PBM
Zhu et al.(2009)
Rtg3
0.914
1.000
RTG3
M08480_2.00
Saccharomyces cerevisiae
NRTSACTCDYN
NRHGAGTSAYN
Misc
DeBoer et al.(2011)
YBL103C_1445
0.914
1.000
RTG3
M08481_2.00
Saccharomyces cerevisiae
NGTGACCS
SGGTCACN
Misc
DeBoer et al.(2011)
YBL103C_1446
0.914
1.000
RTG3
M08482_2.00
Saccharomyces cerevisiae
NNVNDDKCACGTGMNBDNHH
DDNHVNKCACGTGMHHNBNN
Misc
DeBoer et al.(2011)
YBL103C_870
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
1691_Multiple
bHLH
286
345
KREFHNAVERRRRELIKQKIKELGQLVPPSLLNYDDLGKQIKPNKGIILDRTVEYLQYLA
Links
Other
bHLH
family TFs
Other
Saccharomyces mikatae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SKUD_194803
Saccharomyces kudriavzevii
SKUD_194803
I
0.914
SU7_0054
Saccharomyces arboricola
SU7_0054
I
0.914
RTG3
Saccharomyces cerevisiae
YBL103C
D
0.914
1266_YBL103C
Saccharomyces bayanus
1266_YBL103C
I
0.914
730_YBL103C
Saccharomyces paradoxus
730_YBL103C
I
0.914