CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000009360_CONSTRUCT
(
PBM CONSTRUCTS
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
ENSTNIG00000009360_CONSTRUCT
T055766_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSTNIG00000009360_CONSTRUCT
M01130_2.00
PBM CONSTRUCTS
NRGWATKYN
NRMATWCYN
PBM
Lambert et al.(2019)
pTH9830
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01130_2.00
Brinker
10
66
KRCTYKVGFKLEVIKYAKEHGNRAAERHFGPPPSEKMIREWRKQEDQLQKLEKSKHT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIG00000009360_CONSTRUCT
Brinker
10
66
KRCTYKVGFKLEVIKYAKEHGNRAAERHFGPPPSEKMIREWRKQEDQLQKLEKSKHT
Links
Other
Brinker
family TFs
Other
PBM CONSTRUCTS
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000006566
Anolis carolinensis
ENSACAG00000006566
I
0.827
ENSACAG00000023830
Anolis carolinensis
ENSACAG00000023830
I
0.808
Pvit_04393
Pogona vitticeps
Pvit_04393
I
0.808
Pvit_06872
Pogona vitticeps
Pvit_06872
I
0.769
AAH84980
Xenopus laevis
AAH84980
I
0.736