CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf03129-processed-gene-0.0
(
Meloidogyne floridensis
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
augustus_masked-nMf.1.1.scaf03129-processed-gene-0.0
T055847_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf03129-processed-gene-0.0-mRNA-1
Brinker
34
80
KRKAYSLSKKLEVIEYAKKNSKTAAAKRYGIDRRCIIDWFRKEEKIK
Links
Other
Brinker
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc08780
Meloidogyne incognita
Minc08780
N
1.000
Minc04326
Meloidogyne incognita
Minc04326
N
0.952
Minc18190
Meloidogyne incognita
Minc18190
N
0.922
maker-nMf.1.1.scaf08858-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08858-snap-gene-0.4
N
0.804