VIP1 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT1G43700 T056866_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VIP1
M06753_2.00		 Arabidopsis thaliana
DTGMCAGCTGKNHH
DDNMCAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
VIP1_colamp_a		 (Direct) (Direct)
VIP1
M06754_2.00		 Arabidopsis thaliana
DTGMCAGCTGDN
NHCAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
VIP1_col_v3a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G43700.1 bZIP 194 255
AT1G43700.1 bZIP 237 274

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.13847s0002 Capsella grandiflora Cagra.13847s0002 I 0.608
Carubv10009675m.g Capsella rubella Carubv10009675m.g I 0.608
Thhalv10011634m.g Eutrema salsugineum Thhalv10011634m.g I 0.601