CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN06159
(
Caenorhabditis brenneri
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CBN06159
T057957_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
atf-2
M00592_2.00
Caenorhabditis elegans
VTKRYGYAAY
RTTRCRYMAB
PBM
Narasimhan et al.(2015)
pTH9711
0.868
0.900
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN06159
bZIP
57
105
YWERRRRNNDASRRSREKRRLNDQAMEEKIMQLSAENERLKSQLENRST
CBN06159
bZIP
338
398
SPQYVDRRRRNNEAAKRCRANRRAVFEYRSRRVQLLEGENEELRTQIETLKAEIAHFKAVL
Links
Other
bZIP
family TFs
Other
Caenorhabditis brenneri
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN13709
Caenorhabditis brenneri
CBN13709
I
0.905
CBG03150
Caenorhabditis briggsae
CBG03150
I
0.904
CRE02259
Caenorhabditis remanei
CRE02259
I
0.904
CJA05669
Caenorhabditis japonica
CJA05669
I
0.902
ANCCEY_07004
Ancylostoma ceylanicum
ANCCEY_07004
I
0.859
NECAME_12135
Necator americanus
NECAME_12135
I
0.859
TELCIR_00741
Teladorsagia circumcincta
TELCIR_00741
I
0.854
ACOC_0000424101
Angiostrongylus costaricensis
ACOC_0000424101
I
0.821
ASU_12730
Ascaris suum
ASU_12730
N
0.802
PEQ_0000995301
Parascaris equorum
PEQ_0000995301
N
0.802
L893_g9725
Steinernema glaseri
L893_g9725
N
0.801
EVEC_0000289301
Enterobius vermicularis
EVEC_0000289301
N
0.798
L892_g17246
Steinernema scapterisci
L892_g17246
N
0.797
TCNE_0001756201
Toxocara canis
TCNE_0001756201
N
0.797
L596_g5847
Steinernema carpocapsae
L596_g5847
N
0.796
L889_g20553
Steinernema feltiae
L889_g20553
N
0.791