PAN (Arabidopsis lyrata)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 fgenesh2_kg.2__1120__AT1G68640.1 T062353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA10
M06783_2.00 		Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN		 Dap-seq
OMalley et al.(2016)
TGA10_col_a 		0.786 0.706
TGA10
M06784_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA10_colamp_a 		0.786 0.706
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1120__AT1G68640.1 bZIP 157 210

Links

Other bZIP family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.26959s0025 Boechera stricta Bostr.26959s0025 I 0.805
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I 0.788
GLYMA03G29825 Glycine max GLYMA03G29825 I 0.787
GLYMA19G32715 Glycine max GLYMA19G32715 I 0.787
LPERR05G14450 Leersia perrieri LPERR05G14450 I 0.787
OB05G26080 Oryza brachyantha OB05G26080 I 0.787
OBART05G18270 Oryza barthii OBART05G18270 I 0.787
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I 0.787
OLONG_005656 Oryza longistaminata OLONG_005656 I 0.787
OMERI05G15750 Oryza meridionalis OMERI05G15750 I 0.787
ONIVA05G19180 Oryza nivara ONIVA05G19180 I 0.787
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I 0.787
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I 0.787
OS05G0443900 Oryza sativa OS05G0443900 I 0.787
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I 0.787
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I 0.787
PDK_20s1405291g002 Phoenix dactylifera PDK_20s1405291g002 I 0.787
TGA10 Arabidopsis thaliana AT5G06839 D 0.786
BGIOSGA019942 Oryza indica BGIOSGA019942 I 0.786
Bo3g004060 Brassica oleracea Bo3g004060 I 0.786
Bo9g175780 Brassica oleracea Bo9g175780 I 0.786
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I 0.786
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I 0.786
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I 0.786
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I 0.786
Cagra.3364s0020 Capsella grandiflora Cagra.3364s0020 N 0.786
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I 0.786
Carubv10003744m.g Capsella rubella Carubv10003744m.g I 0.786
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I 0.786
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I 0.786
Carubv10021345m.g Capsella rubella Carubv10021345m.g N 0.785
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I 0.783
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I 0.783
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I 0.783