CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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crh-2
(
Caenorhabditis elegans
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
WBGene00016162
T069412_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crh-2
M00603_2.00
Caenorhabditis elegans
NBACGTGGMN
NKCCACGTVN
PBM
Narasimhan et al.(2015)
pTH9879
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00603_2.00
bZIP
51
117
EESLKIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKLHQYE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C27D6.4a
bZIP
153
220
EESLKIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKLHQYES
C27D6.4b
bZIP
258
323
EESLKIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKLHQY
C27D6.4c
bZIP
280
344
EESLKIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKLHQ
C27D6.4d
bZIP
148
214
EESLKIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKLHQYE
Links
Other
bZIP
family TFs
Other
Caenorhabditis elegans
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE11919
Caenorhabditis remanei
CRE11919
I
0.867
CBG02346
Caenorhabditis briggsae
CBG02346
I
0.855
CBN32381
Caenorhabditis brenneri
CBN32381
I
0.855
CJA21145
Caenorhabditis japonica
CJA21145
I
0.849