CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.189.102.1
(
Physcomitrella patens
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
gw1.189.102.1
T071158_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.814
0.727
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.189.102.1
bZIP
1
55
RMLSNRESARRSRRKKQAHLSDLETQVAQLRAENSTLLQRLQEITYMHKDASVDN
Links
Other
bZIP
family TFs
Other
Physcomitrella patens
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.213.115.1
Physcomitrella patens
gw1.213.115.1
I
0.834
Lus10006590.g
Linum usitatissimum
Lus10006590.g
I
0.815
Ca_03753
Cicer arietinum
Ca_03753
I
0.814
Cla015037
Citrullus lanatus
Cla015037
I
0.814
Cla020112
Citrullus lanatus
Cla020112
I
0.814
Cucsa.133290
Cucumis sativus
Cucsa.133290
I
0.814
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
0.814
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
0.814
PK05128.1
Cannabis sativa
PK05128.1
D
0.814
Lus10015913.g
Linum usitatissimum
Lus10015913.g
I
0.808
29598.m000468
Ricinus communis
29598.m000468
I
0.800
Cucsa.289120
Cucumis sativus
Cucsa.289120
I
0.800
mgf009803m
Mimulus guttatus
mgf009803m
I
0.800
GLYMA03G40730
Glycine max
GLYMA03G40730
I
0.799
GLYMA19G43420
Glycine max
GLYMA19G43420
I
0.799
GSMUA_Achr4G28530_001
Musa acuminata
GSMUA_Achr4G28530_001
I
0.799
PGSC0003DMG400019455
Solanum tuberosum
PGSC0003DMG400019455
I
0.799
POPTR_0013s03800
Populus trichocarpa
POPTR_0013s03800
I
0.799
Solyc01g097330.2
Solanum lycopersicum
Solyc01g097330.2
I
0.799
Solyc08g022080.2
Solanum lycopersicum
Solyc08g022080.2
I
0.799
TCM_026349
Theobroma cacao
TCM_026349
I
0.799
BZO2H3
Vitis vinifera
VIT_14s0030g02200
I
0.799
cassava22706.valid.m1
Manihot esculenta
cassava22706.valid.m1
I
0.799
gene16561-v1.0-hybrid
Fragaria vesca
gene16561-v1.0-hybrid
I
0.799
orange1.1g012287m.g
Citrus sinensis
orange1.1g012287m.g
I
0.799
SapurV1A.0110s0140
Salix purpurea
SapurV1A.0110s0140
I
0.799
SapurV1A.0729s0180
Salix purpurea
SapurV1A.0729s0180
I
0.799
Aquca_017_00582
Aquilegia coerulea
Aquca_017_00582
I
0.798
Bra010010
Brassica rapa
Bra010010
I
0.796
BZO2H3
Arabidopsis lyrata
fgenesh2_kg.6__2797__AT5G28770.2
I
0.793
Sb08g020600
Sorghum bicolor
Sb08g020600
I
0.792
gw1.220.22.1
Physcomitrella patens
gw1.220.22.1
I
0.792
Ciclev10001051m.g
Citrus clementina
Ciclev10001051m.g
I
0.791
mgf012838m
Mimulus guttatus
mgf012838m
I
0.789
PK11472.1
Cannabis sativa
PK11472.1
I
0.789
PDK_20s1482361g001
Phoenix dactylifera
PDK_20s1482361g001
I
0.788
LPERR12G15130
Leersia perrieri
LPERR12G15130
I
0.787
MDP0000270365
Malus domestica
MDP0000270365
I
0.787
AMTR_s00002p00268140
Amborella trichopoda
AMTR_s00002p00268140
I
0.786
GSMUA_Achr10G08670_001
Musa acuminata
GSMUA_Achr10G08670_001
I
0.786
OPUNC12G16360
Oryza punctata
OPUNC12G16360
I
0.786
PRUPE_ppa005367mg
Prunus persica
PRUPE_ppa005367mg
I
0.786
Pm020231
Prunus mume
Pm020231
I
0.786
Ciclev10020133m.g
Citrus clementina
Ciclev10020133m.g
I
0.783
orange1.1g013166m.g
Citrus sinensis
orange1.1g013166m.g
I
0.783
Bo7g093030
Brassica oleracea
Bo7g093030
I
0.782
Bra020620
Brassica rapa
Bra020620
I
0.782