Carubv10020476m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10020476m.g T071586_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA7
M01774_2.00 		Arabidopsis thaliana
WKACGTCAYN
NRTGACGTMW		 PBM
Weirauch et al.(2014)
pTH7198 		0.806 0.909
TGA7
M06758_2.00 		Arabidopsis thaliana
NYNACGTCABCDNY
RNHGVTGACGTNRN		 Dap-seq
OMalley et al.(2016)
bZIP50_colamp_v31 		0.806 0.909
TGA7
M06759_2.00 		Arabidopsis thaliana
NDNNDRTGACGTCAKCN
NGMTGACGTCAYHNNHN		 Dap-seq
OMalley et al.(2016)
bZIP50_col_v31 		0.806 0.909
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10020476m bZIP 91 145

Links

Other bZIP family TFs
Other Capsella rubella TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0096s0044 Capsella grandiflora Cagra.0096s0044 I 0.810
Al_scaffold_0002_2497 Arabidopsis lyrata Al_scaffold_0002_2497 I 0.806
TGA7 Arabidopsis thaliana AT1G77920 D 0.806
Bo6g081910 Brassica oleracea Bo6g081910 I 0.806
Thhalv10018715m.g Eutrema salsugineum Thhalv10018715m.g I 0.806
Bra015646 Brassica rapa Bra015646 I 0.783