CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.009G285000
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.009G285000
T071966_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27109.1
M01163_2.00
Cannabis sativa
KACAGCTR
YAGCTGTM
PBM
Lambert et al.(2019)
pTH10158
0.835
0.935
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G285000.1
bZIP
165
226
DPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQVTVLQRDTTGLTTENK
Gorai.009G285000.2
bZIP
165
217
DPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQVTVLQRD
Gorai.009G285000.2
bZIP
208
246
SAQVTVLQRDTTGLTTENKELKLRLQAMEQQAQLRDGNM
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014037
Citrullus lanatus
Cla014037
I
0.839
Cucsa.363640
Cucumis sativus
Cucsa.363640
I
0.839
AMTR_s00030p00014690
Amborella trichopoda
AMTR_s00030p00014690
I
0.835
VIP1
Vitis vinifera
VIT_18s0076g00330
I
0.835
Cla015261
Citrullus lanatus
Cla015261
I
0.835
Aquca_023_00109
Aquilegia coerulea
Aquca_023_00109
I
0.835
Ciclev10001715m.g
Citrus clementina
Ciclev10001715m.g
I
0.835
Eucgr.F02715
Eucalyptus grandis
Eucgr.F02715
I
0.835
orange1.1g019163m.g
Citrus sinensis
orange1.1g019163m.g
I
0.835
SapurV1A.0066s0110
Salix purpurea
SapurV1A.0066s0110
I
0.835
PK27109.1
Cannabis sativa
PK27109.1
D
0.835
BGIOSGA037037
Oryza indica
BGIOSGA037037
I
0.822
BRADI4G41890
Brachypodium distachyon
BRADI4G41890
I
0.822
GRMZM2G079365
Zea mays
GRMZM2G079365
I
0.822
GRMZM5G821024
Zea mays
GRMZM5G821024
I
0.822
LPERR12G03530
Leersia perrieri
LPERR12G03530
I
0.822
MLOC_71198
Hordeum vulgare
MLOC_71198
I
0.822
OB11G13300
Oryza brachyantha
OB11G13300
I
0.822
OB12G13750
Oryza brachyantha
OB12G13750
I
0.822
OBART11G03920
Oryza barthii
OBART11G03920
I
0.822
OBART12G03760
Oryza barthii
OBART12G03760
I
0.822
OGLUM12G04480
Oryza glumaepatula
OGLUM12G04480
I
0.822
OLONG_001598
Oryza longistaminata
OLONG_001598
I
0.822
OMERI12G02030
Oryza meridionalis
OMERI12G02030
I
0.822
ONIVA11G04030
Oryza nivara
ONIVA11G04030
I
0.822
ONIVA12G03450
Oryza nivara
ONIVA12G03450
I
0.822
ORGLA11G0036500
Oryza glaberrima
ORGLA11G0036500
I
0.822
ORGLA12G0036800
Oryza glaberrima
ORGLA12G0036800
I
0.822
ORUFI11G03840
Oryza rufipogon
ORUFI11G03840
I
0.822
ORUFI12G04380
Oryza rufipogon
ORUFI12G04380
I
0.822
OS12G0162500
Oryza sativa
OS12G0162500
I
0.822
POPTR_0005s21300
Populus trichocarpa
POPTR_0005s21300
I
0.822
Sb05g003810
Sorghum bicolor
Sb05g003810
I
0.822
Sb08g003940
Sorghum bicolor
Sb08g003940
I
0.822
Si010549m.g
Setaria italica
Si010549m.g
I
0.822
Si026605m.g
Setaria italica
Si026605m.g
I
0.822
Traes_4AL_273ACCFFD
Triticum aestivum
Traes_4AL_273ACCFFD
I
0.822
Traes_4BS_ED206A2BB
Triticum aestivum
Traes_4BS_ED206A2BB
I
0.822
Traes_4DS_FE97492F2
Triticum aestivum
Traes_4DS_FE97492F2
I
0.822
Traes_5DL_841444545
Triticum aestivum
Traes_5DL_841444545
I
0.822
TRIUR3_12877
Triticum urartu
TRIUR3_12877
I
0.822
TRIUR3_31416
Triticum urartu
TRIUR3_31416
I
0.822
Pavir.Ca00211
Panicum virgatum
Pavir.Ca00211
I
0.822
Pavir.Ha01827
Panicum virgatum
Pavir.Ha01827
I
0.822
Pavir.Hb01916
Panicum virgatum
Pavir.Hb01916
I
0.822
LPERR11G03390
Leersia perrieri
LPERR11G03390
I
0.822
GSMUA_Achr6G13040_001
Musa acuminata
GSMUA_Achr6G13040_001
I
0.813
mgf003343m
Mimulus guttatus
mgf003343m
I
0.813
Lus10029773.g
Linum usitatissimum
Lus10029773.g
I
0.812
Lus10042802.g
Linum usitatissimum
Lus10042802.g
I
0.812
BRADI4G24937
Brachypodium distachyon
BRADI4G24937
I
0.811
GRMZM2G136266
Zea mays
GRMZM2G136266
I
0.808
GLYMA16G28370
Glycine max
GLYMA16G28370
I
0.806
SapurV1A.0256s0010
Salix purpurea
SapurV1A.0256s0010
I
0.803
SapurV1A.1302s0050
Salix purpurea
SapurV1A.1302s0050
I
0.803
GRMZM2G146020
Zea mays
GRMZM2G146020
I
0.796
Gorai.005G079700
Gossypium raimondii
Gorai.005G079700
N
0.791
PDK_20s1522421g002
Phoenix dactylifera
PDK_20s1522421g002
I
0.790
GSMUA_Achr6G18130_001
Musa acuminata
GSMUA_Achr6G18130_001
I
0.789
GSMUA_Achr3G19170_001
Musa acuminata
GSMUA_Achr3G19170_001
I
0.787