CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb01669
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Bb01669
T072331_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb01669.1.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Pavir.Bb01669.2.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Pavir.Bb01669.3.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Pavir.Bb01669.4.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Pavir.Bb01669.5.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Pavir.Bb01669.6.p
bZIP
106
151
RDPKTLRRLAQNREAARKSRLRKKAYIQQLETSRIRLSQLEQQVQV
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g018870
Sorghum bicolor
Sb02g018870
N
0.800
Si029966m.g
Setaria italica
Si029966m.g
N
0.800
Pavir.Ba03862
Panicum virgatum
Pavir.Ba03862
N
0.800
BRADI4G27100
Brachypodium distachyon
BRADI4G27100
N
0.795
F775_03277
Aegilops tauschii
F775_03277
N
0.795
MLOC_37092
Hordeum vulgare
MLOC_37092
N
0.795
Traes_5AL_0C11447DF
Triticum aestivum
Traes_5AL_0C11447DF
N
0.795
Traes_5BL_A4B8421A7
Triticum aestivum
Traes_5BL_A4B8421A7
N
0.795
Traes_5DL_9935B1BF4
Triticum aestivum
Traes_5DL_9935B1BF4
N
0.795
TRIUR3_06066
Triticum urartu
TRIUR3_06066
N
0.795