CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RO3G_05377
(
Rhizopus oryzae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RO3G_05377
T078171_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_05376
C2H2 ZF
204
229
FTCTHDECGKVFKRSEHLKRHIRSIH
RO3T_05376
C2H2 ZF
235
259
YECPYQNCSKRFSRSDNLNQHIRIH
Links
Other
C2H2 ZF
family TFs
Other
Rhizopus oryzae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.40.70.1
Phycomyces blakesleeanus
gw1.40.70.1
N
0.821
RO3G_00665
Rhizopus oryzae
RO3G_00665
N
0.816
RO3G_17178
Rhizopus oryzae
RO3G_17178
N
0.816
fgeneshPB_pg.26__26
Phycomyces blakesleeanus
fgeneshPB_pg.26__26
N
0.816
fgeneshMC_pg.6_#_614
Mucor circinelloides
fgeneshMC_pg.6_#_614
N
0.810
estExt_fgeneshMC_pg.C_20214
Mucor circinelloides
estExt_fgeneshMC_pg.C_20214
N
0.810
fgeneshPB_pg.4__728
Phycomyces blakesleeanus
fgeneshPB_pg.4__728
N
0.786
fgeneshPB_pg.30__130
Phycomyces blakesleeanus
fgeneshPB_pg.30__130
N
0.756