CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_03566
(
Verticillium albo atrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
VDBG_03566
T078387_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03566T0
C2H2 ZF
46
70
FACRWDECGKSFPRPSDLTKHERYH
VDBG_03566T0
C2H2 ZF
74
98
YHCDEVDCCKAFATHKDLKRHKKTH
VDBG_03566T0
C2H2 ZF
110
140
YRCRVPGCRKAKTGHVYNRRDNFTRHLRTKH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_10482
Verticillium dahliae
VDAG_10482
N
0.827
VDBG_03566
Verticillium alfalfae
VDBG_03566
N
0.827