TFIIIA (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT1G72050 T080837_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFIIIA
M06804_2.00		 Arabidopsis thaliana
CYTCHTCCTCHTCCTCCTC
GAGGAGGADGAGGADGARG		 Dap-seq
OMalley et al.(2016)
TF3A_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G72050.1 C2H2 ZF 6 30
AT1G72050.1 C2H2 ZF 35 60
AT1G72050.1 C2H2 ZF 127 151
AT1G72050.1 C2H2 ZF 160 184
AT1G72050.1 C2H2 ZF 217 242
AT1G72050.1 C2H2 ZF 248 274
AT1G72050.2 C2H2 ZF 20 43
AT1G72050.2 C2H2 ZF 66 88
AT1G72050.2 C2H2 ZF 94 118
AT1G72050.2 C2H2 ZF 123 148
AT1G72050.2 C2H2 ZF 215 239
AT1G72050.2 C2H2 ZF 248 272
AT1G72050.2 C2H2 ZF 305 330
AT1G72050.2 C2H2 ZF 336 362
AT1G72050.3 C2H2 ZF 35 58
AT1G72050.3 C2H2 ZF 81 103
AT1G72050.3 C2H2 ZF 109 133
AT1G72050.3 C2H2 ZF 138 163
AT1G72050.3 C2H2 ZF 230 254
AT1G72050.3 C2H2 ZF 263 287
AT1G72050.3 C2H2 ZF 320 345
AT1G72050.3 C2H2 ZF 351 377
AT1G72050.4 C2H2 ZF 6 30
AT1G72050.4 C2H2 ZF 35 60
AT1G72050.4 C2H2 ZF 127 151
AT1G72050.4 C2H2 ZF 160 184
AT1G72050.4 C2H2 ZF 217 242
AT1G72050.4 C2H2 ZF 248 274

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action