CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00003173
(
Aspergillus niger
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CADANGAG00003173
T082190_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001539264.1
M01472_2.00
Histoplasma capsulatum
MCCCCACYYH
DRRGTGGGGK
PBM
Najafabadi et al.(2015a)
pTH11150
0.777
0.805
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00003094
C2H2 ZF
4
28
HVCHWPNCGKTFTRAEHLRRHALNH
CADANGAP00003094
C2H2 ZF
35
52
YTCERCSVHFHRPDLLSR
Links
Other
C2H2 ZF
family TFs
Other
Aspergillus niger
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.00626.12.1
Aspergillus carbonarius
gw1.00626.12.1
I
0.802
BDDG_05885
Blastomyces dermatitidis
BDDG_05885
I
0.777
PAAG_11662
Paracoccidioides sp lutzii
PAAG_11662
I
0.777
PABG_12465
Paracoccidioides brasiliensis
PABG_12465
I
0.777
XP_001539264.1
Histoplasma capsulatum
XP_001539264.1
D
0.777
EURHEDRAFT_382983
Aspergillus ruber
EURHEDRAFT_382983
I
0.759