CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN29788
(
Caenorhabditis brenneri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBN29788
T083084_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN29788
C2H2 ZF
86
108
YECEDCHEMFAVKRELATHMRIH
CBN29788
C2H2 ZF
114
136
HTCTQCGKEFGTRQLLKKHWMWH
CBN29788
C2H2 ZF
142
164
HVCPHCNKAFFQKGHLTQHLMIH
CBN29788
C2H2 ZF
170
192
HECPQCHKTFIFKFDLNRHMKIH
CBN29788
C2H2 ZF
197
218
FSCLQCGRSFLKQIMLDEHHLK
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis brenneri
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN17613
Caenorhabditis brenneri
CBN17613
N
0.827
CJA11027
Caenorhabditis japonica
CJA11027
N
0.771
CRE15848
Caenorhabditis remanei
CRE15848
N
0.771
CRE16858
Caenorhabditis remanei
CRE16858
N
0.771
M03D4.4
Caenorhabditis elegans
WBGene00019751
D
0.769
CBG05518
Caenorhabditis briggsae
CBG05518
N
0.767