CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CNA00290
(
Cryptococcus neoformans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CNA00290
T083888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_20754
M01456_2.00
Puccinia graminis
NNGATCDNCN
NGNHGATCNN
PBM
Najafabadi et al.(2015a)
pTH10232
0.757
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAW40644
C2H2 ZF
605
627
YTCTYCVKTFSRPSSLKIHTYSH
AAW40644
C2H2 ZF
633
657
YICNEAGCGRRFSVQSNLKRHAKVH
Links
Other
C2H2 ZF
family TFs
Other
Cryptococcus neoformans
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L804_00861
Cryptococcus gattii
L804_00861
I
0.803
WALSEDRAFT_69186
Wallemia sebi
WALSEDRAFT_69186
N
0.763
J056_003737
Wallemia ichthyophaga
J056_003737
N
0.763
A1Q1_02097
Trichosporon asahii
A1Q1_02097
N
0.761
PGTG_20754
Puccinia graminis
PGTG_20754
D
0.757
PTTG_01134
Puccinia triticina
PTTG_01134
I
0.757