CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC1
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000011777
T086066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.767
0.930
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.767
0.930
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.767
0.930
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.767
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000011510
C2H2 ZF
399
421
YVCIPCGKGFPSSEELNAHVEAH
ENSACAP00000011510
C2H2 ZF
453
475
YRCNSCEKAYKDPATLRQHEKTH
ENSACAP00000011510
C2H2 ZF
481
503
YPCSICGKKFTQRGTMTRHMRSH
ENSACAP00000011510
C2H2 ZF
509
531
FACEACGMRFTRQYRLTEHMRIH
ENSACAP00000011510
C2H2 ZF
537
559
YECRVCGGKFAQQRNLLSHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000024918
Astyanax mexicanus
ENSAMXG00000024918
I
0.785
hic2
Danio rerio
ENSDARG00000100497
I
0.785
ENSLACG00000007028
Latimeria chalumnae
ENSLACG00000007028
I
0.769
HIC1
Cavia porcellus
ENSCPOG00000020382
I
0.767
ENSFALG00000006543
Ficedula albicollis
ENSFALG00000006543
I
0.767
ENSGALG00000026718
Gallus gallus
ENSGALG00000026718
I
0.767
ENSMGAG00000005397
Meleagris gallopavo
ENSMGAG00000005397
I
0.767
Hic1
Mus musculus
ENSMUSG00000043099
D
0.767
ENSPSIG00000007902
Pelodiscus sinensis
ENSPSIG00000007902
I
0.767
HIC1
Taeniopygia guttata
ENSTGUG00000005835
I
0.767
Aan_R003503
Calypte anna
Aan_R003503
I
0.767
Afo_R013473
Aptenodytes forsteri
Afo_R013473
I
0.767
Alligator_sinensis_CCG008952.1
Alligator sinensis
Alligator_sinensis_CCG008952.1
I
0.767
XP_002937184
Xenopus tropicalis
XP_002937184
I
0.767
hic1
Gasterosteus aculeatus
ENSGACG00000010848
I
0.763
hic1
Takifugu rubripes
ENSTRUG00000004590
I
0.763
hic1
Oryzias latipes
ENSORLG00000004895
I
0.760