CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZSCAN1
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000000370
T089182_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN1
M04483_2.00
Homo sapiens
NHRCACACVCTGHMAVH
DBTKDCAGBGTGTGYDN
SELEX
Yin et al.(2017)
ZSCAN1_eDBD_HT-SELEX
0.778
0.928
ZSCAN1
M04484_2.00
Homo sapiens
NYGCACACMCTGHMAVH
DBTKDCAGKGTGTGCRN
SELEX
Yin et al.(2017)
ZSCAN1_eDBD_Methyl-HT-SELEX
0.778
0.928
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000000614
C2H2 ZF
169
191
FQCADCGMVFTWVTHFIEHQKTH
ENSCJAP00000000614
C2H2 ZF
197
219
FPCPECGKVFLHSSVLAEHSKIH
ENSCJAP00000000614
C2H2 ZF
257
279
FRCSVCGKSFPWMVHLIDHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000001612
Chlorocebus sabaeus
ENSCSAG00000001612
I
0.811
ENSMMUG00000020497
Macaca mulatta
ENSMMUG00000020497
I
0.811
ENSP00000282326
Macaca fascicularis
ENSP00000282326
I
0.811
ENSPANG00000009307
Papio anubis
ENSPANG00000009307
I
0.807
ZSCAN1
Gorilla gorilla
ENSGGOG00000015539
I
0.798
ENSNLEG00000011057
Nomascus leucogenys
ENSNLEG00000011057
I
0.798
ENSPPYG00000010489
Pongo abelii
ENSPPYG00000010489
I
0.798
ZSCAN1
Pan troglodytes
ENSPTRG00000011580
I
0.798
ZSCAN1
Homo sapiens
ENSG00000152467
D
0.778