hic1 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000055493 T090954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIC1
M04568_2.00 		Homo sapiens
NRTGCCMMCN
NGKKGGCAYN		 SELEX
Yin et al.(2017)
HIC1_eDBD_HT-SELEX 		0.822 0.978
HIC1
M08924_2.00 		Homo sapiens
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_HUMAN.H11MO.0.C 		0.822 0.978
HIC1
M10265_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIC1_02 		0.822 0.978
HIC1
M10266_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIC1_03 		0.822 0.978
HIC1
M04569_2.00 		Homo sapiens
NRTGCCMMCN
NGKKGGCAYN		 SELEX
Yin et al.(2017)
HIC1_eDBD_Methyl-HT-SELEX 		0.822 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000072319 C2H2 ZF 526 548
ENSDARP00000072319 C2H2 ZF 554 576
ENSDARP00000072319 C2H2 ZF 582 604
ENSDARP00000072319 C2H2 ZF 610 632

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000024869 Astyanax mexicanus ENSAMXG00000024869 I 0.827
ENSLOCG00000006478 Lepisosteus oculatus ENSLOCG00000006478 I 0.827
ENSAMEG00000007657 Ailuropoda melanoleuca ENSAMEG00000007657 I 0.822
HIC1 Bos taurus ENSBTAG00000025130 I 0.822
HIC1 Canis familiaris ENSCAFG00000019257 I 0.822
ENSCSAG00000013805 Chlorocebus sabaeus ENSCSAG00000013805 I 0.822
HIC1 Dasypus novemcinctus ENSDNOG00000049226 I 0.822
ENSDORG00000016613 Dipodomys ordii ENSDORG00000016613 I 0.822
HIC1 Homo sapiens ENSG00000177374 D 0.822
HIC1 Gorilla gorilla ENSGGOG00000027584 I 0.822
HIC1 Loxodonta africana ENSLAFG00000001259 I 0.822
HIC1 Myotis lucifugus ENSMLUG00000010527 I 0.822
ENSMMUG00000030393 Macaca mulatta ENSMMUG00000030393 I 0.822
ENSMPUG00000019502 Mustela putorius furo ENSMPUG00000019502 I 0.822
HIC1 Otolemur garnettii ENSOGAG00000034845 I 0.822
ENSPANG00000024595 Papio anubis ENSPANG00000024595 I 0.822
HIC1 Procavia capensis ENSPCAG00000000535 I 0.822
ENSPPYG00000007789 Pongo abelii ENSPPYG00000007789 I 0.822
ENSPTRG00000008543 Pan troglodytes ENSPTRG00000008543 I 0.822
HIC1 Pteropus vampyrus ENSPVAG00000002158 I 0.822
Hic1 Rattus norvegicus ENSRNOG00000046405 I 0.822
LOC100912068 Rattus norvegicus ENSRNOG00000057619 I 0.822
HIC1 Sorex araneus ENSSARG00000010162 I 0.822
HIC1 Sus scrofa ENSSSCG00000025717 I 0.822
ENSSTOG00000011792 Ictidomys tridecemlineatus ENSSTOG00000011792 I 0.822
Myotis_brandtii_HIC1_10015709 Myotis brandtii Myotis_brandtii_HIC1_10015709 I 0.822
ENSONIG00000021060 Oreochromis niloticus ENSONIG00000021060 I 0.821
ENSPFOG00000004471 Poecilia formosa ENSPFOG00000004471 I 0.821
ENSXMAG00000001419 Xiphophorus maculatus ENSXMAG00000001419 I 0.821
HIC1 Microcebus murinus ENSMICG00000012908 I 0.810
ENSGMOG00000011705 Gadus morhua ENSGMOG00000011705 I 0.796
HIC2 Monodelphis domestica ENSMODG00000017662 I 0.794
ENSNLEG00000000203 Nomascus leucogenys ENSNLEG00000000203 I 0.794