zeb2a (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000062338 T090987_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including chordate embryonic development; convergent extension; and negative regulation of fibroblast growth factor receptor signaling pathway. Is expressed in several structures, including head; nervous system; neural plate; neuroectoderm; and tail bud. Human ortholog(s) of this gene implicated in Hirschsprung's disease and Mowat-Wilson syndrome. Orthologous to human ZEB2 (zinc finger E-box binding homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000104669 C2H2 ZF 180 202
ENSDARP00000104669 C2H2 ZF 208 229
ENSDARP00000105699 C2H2 ZF 214 237
ENSDARP00000105699 C2H2 ZF 244 266
ENSDARP00000105699 C2H2 ZF 285 307
ENSDARP00000105699 C2H2 ZF 313 334
ENSDARP00000105699 C2H2 ZF 1000 1022
ENSDARP00000105699 C2H2 ZF 1028 1050
ENSDARP00000105699 C2H2 ZF 1056 1077

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSMEUG00000008117 Macropus eugenii ENSMEUG00000008117 N 0.786
ZEB1 Ornithorhynchus anatinus ENSOANG00000006051 N 0.786
PEQ_0001398501 Parascaris equorum PEQ_0001398501 N 0.772
MESCA011423 Megaselia scalaris MESCA011423 N 0.763
AMAM017593 Anopheles maculatus AMAM017593 N 0.763