CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:ch1073-224n8.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000104485
T091971_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000140978
C2H2 ZF
391
413
HLCLECGKTFRLISSLKKHLRIH
ENSDARP00000140978
C2H2 ZF
419
441
YPCTVCGRRFRESGALKTHLRIH
ENSDARP00000140978
C2H2 ZF
447
469
YSCSDCGTQFRHLDGLRKHRRTH
ENSDARP00000140978
C2H2 ZF
475
497
YVCSICGKRLSRLQHLKHHQRIH
ENSDARP00000140978
C2H2 ZF
503
525
CCCPLCHRGFKDPASLRKHLRAH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:ch1073-224n8.1
Oryzias latipes
ENSORLG00000007212
N
0.756
ENSPFOG00000023555
Poecilia formosa
ENSPFOG00000023555
N
0.756
si:ch1073-224n8.1
Tetraodon nigroviridis
ENSTNIG00000010054
N
0.756