CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL6B
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000161940
T095014_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in several processes, including regulation of gene expression; regulation of inflammatory response; and type 2 immune response. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
(Direct)
(Direct)
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
(Direct)
(Direct)
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
(Direct)
(Direct)
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
(Direct)
(Direct)
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.818
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000293805
C2H2 ZF
328
350
YKCQLCRSSFRYKGNLASHRTVH
ENSP00000293805
C2H2 ZF
356
378
YHCSICGARFNRPANLKTHSRIH
ENSP00000293805
C2H2 ZF
384
406
YKCETCGSRFVQVAHLRAHVLIH
ENSP00000293805
C2H2 ZF
412
434
YPCPTCGTRFRHLQTLKSHVRIH
ENSP00000293805
C2H2 ZF
440
463
YHCDPCGLHFRHKSQLRLHLRQKH
ENSP00000445010
C2H2 ZF
17
39
YKCQLCRSSFRYKGNLASHRTVH
ENSP00000445010
C2H2 ZF
45
67
YHCSICGARFNRPANLKTHSRIH
ENSP00000445010
C2H2 ZF
73
95
YKCETCGSRFVQVAHLRAHVLIH
ENSP00000445010
C2H2 ZF
101
123
YPCPTCGTRFRHLQTLKSHVRIH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMPUG00000010670
Mustela putorius furo
ENSMPUG00000010670
I
0.827
ENSSTOG00000006365
Ictidomys tridecemlineatus
ENSSTOG00000006365
I
0.827
BCL6B
Tupaia belangeri
ENSTBEG00000005792
I
0.827
BCL6B
Macaca mulatta
ENSMMUG00000016268
I
0.827
ENSMLUG00000003564
Myotis lucifugus
ENSMLUG00000003564
I
0.827
ENSNLEG00000009340
Nomascus leucogenys
ENSNLEG00000009340
I
0.827
BCL6B
Sus scrofa
ENSSSCG00000017927
I
0.827
ENSPANG00000024201
Papio anubis
ENSPANG00000024201
I
0.827
ENSPPYG00000007891
Pongo abelii
ENSPPYG00000007891
I
0.827
BCL6B
Pan troglodytes
ENSPTRG00000008656
I
0.827
ENSAMEG00000016319
Ailuropoda melanoleuca
ENSAMEG00000016319
I
0.827
BCL6B
Vicugna pacos
ENSVPAG00000003583
N
0.827
BCL6B
Loxodonta africana
ENSLAFG00000006642
I
0.827
BCL6B
Cavia porcellus
ENSCPOG00000004066
I
0.827
BCL6B
Callithrix jacchus
ENSCJAG00000016905
N
0.827
Myotis_brandtii_BCL6B_10021005
Myotis brandtii
Myotis_brandtii_BCL6B_10021005
I
0.827
BCL6B
Bos taurus
ENSBTAG00000020854
I
0.827
ENSCSAG00000012171
Chlorocebus sabaeus
ENSCSAG00000012171
I
0.827
ENSP00000293805
Macaca fascicularis
ENSP00000293805
I
0.827
BCL6B
Gorilla gorilla
ENSGGOG00000009787
I
0.827
ENSP00000293805-D1
Bos grunniens
ENSP00000293805-D1
I
0.827
BCL6B
Equus caballus
ENSECAG00000023771
I
0.827
Bcl6b
Dipodomys ordii
ENSDORG00000005538
I
0.827
BCL6B
Procavia capensis
ENSPCAG00000013548
I
0.827
BCL6B
Otolemur garnettii
ENSOGAG00000027908
I
0.825
ENSOARG00000009610
Ovis aries
ENSOARG00000009610
I
0.825
BCL6B
Echinops telfairi
ENSETEG00000012364
N
0.824
BCL6B
Canis familiaris
ENSCAFG00000015968
I
0.823
BCL6B
Dasypus novemcinctus
ENSDNOG00000035586
I
0.821
ENSMEUG00000000375
Macropus eugenii
ENSMEUG00000000375
I
0.821
ENSSHAG00000000166
Sarcophilus harrisii
ENSSHAG00000000166
I
0.820
BCL6B
Monodelphis domestica
ENSMODG00000006161
I
0.819
BCL6B
Ochotona princeps
ENSOPRG00000006070
I
0.818
Bcl6b
Mus musculus
ENSMUSG00000000317
D
0.818
Bcl6b
Rattus norvegicus
ENSRNOG00000059956
I
0.815
BCL6B
Tursiops truncatus
ENSTTRG00000003982
I
0.812
bcl6ab
Takifugu rubripes
ENSTRUG00000001788
I
0.811
bcl6ab
Tetraodon nigroviridis
ENSTNIG00000007834
I
0.811
ENSPSIG00000013071
Pelodiscus sinensis
ENSPSIG00000013071
I
0.803
bcl6ab
Oryzias latipes
ENSORLG00000004563
I
0.802
Alligator_sinensis_CCG005035.1
Alligator sinensis
Alligator_sinensis_CCG005035.1
I
0.794