CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zfpm1
(
Gasterosteus aculeatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGACG00000002554
T095545_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000003346
C2H2 ZF
124
145
FPCKDCGIWYRSERNLQAHLMY
ENSGACP00000003346
C2H2 ZF
174
197
ICPFPQCNKSCPSASSLEIHMRTH
ENSGACP00000003346
C2H2 ZF
203
225
FVCLICLSAFTTKANCERHLKVH
ENSGACP00000003346
C2H2 ZF
232
254
VCHGCGFVSTTRDILYSHLVTSH
ENSGACP00000003346
C2H2 ZF
290
312
LKCQVCGHNSDSPAQLQQHVRTH
Links
Other
C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000022969
Poecilia formosa
ENSPFOG00000022969
N
0.827
ENSXMAG00000009855
Xiphophorus maculatus
ENSXMAG00000009855
N
0.827
ENSONIG00000010766
Oreochromis niloticus
ENSONIG00000010766
N
0.822
zfpm1
Takifugu rubripes
ENSTRUG00000001306
N
0.771
zfpm1
Oryzias latipes
ENSORLG00000013995
N
0.764
ENSAMXG00000003720
Astyanax mexicanus
ENSAMXG00000003720
N
0.763
zfpm1
Danio rerio
ENSDARG00000041572
N
0.763
ENSLOCG00000002480
Lepisosteus oculatus
ENSLOCG00000002480
N
0.759