CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF439
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000001134
T096070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF439
M07627_2.00
Homo sapiens
CADBCACCYTSWGG
CCWSARGGTGVHTG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF439.MEME.OriginalMapping
0.791
0.980
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000001118
C2H2 ZF
187
209
YACKECGKNIIYHSSIQRHMVVH
ENSGGOP00000001118
C2H2 ZF
215
237
YKCKFCGKAFHCLSLYLIHERTH
ENSGGOP00000001118
C2H2 ZF
243
265
CECKQCGKSFSYSATHRIHERTH
ENSGGOP00000001118
C2H2 ZF
271
293
YECQKCGKAFHSPRSCHRHERSH
ENSGGOP00000001118
C2H2 ZF
299
321
YQCKECGKAFMCPRYVRRHERTH
ENSGGOP00000001118
C2H2 ZF
327
349
YECKQCGKALSSLTSFQTHIRMH
ENSGGOP00000001118
C2H2 ZF
355
377
YECKTCGKGFYSAKSFQRHEKTH
ENSGGOP00000001118
C2H2 ZF
383
405
YKCKQCGKAFTRSGSFRYHERTH
ENSGGOP00000001118
C2H2 ZF
411
433
YECKQCGKAFRSARNLQLHGRTH
ENSGGOP00000001118
C2H2 ZF
439
461
YQCKECGKAFRSASQLRMHRRIH
ENSGGOP00000001118
C2H2 ZF
467
491
YECKECGKAFRYVQNFRFHERTQTH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF439
Homo sapiens
ENSG00000171291
D
0.791