ZNF250 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000016670 T097403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.805 0.953
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.805 0.953
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.805 0.953
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.805 0.953
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.805 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000013990 C2H2 ZF 173 195
ENSLAFP00000013990 C2H2 ZF 201 223
ENSLAFP00000013990 C2H2 ZF 229 251
ENSLAFP00000013990 C2H2 ZF 257 279
ENSLAFP00000013990 C2H2 ZF 285 307
ENSLAFP00000013990 C2H2 ZF 313 335
ENSLAFP00000013990 C2H2 ZF 341 363
ENSLAFP00000013990 C2H2 ZF 369 391
ENSLAFP00000013990 C2H2 ZF 397 419
ENSLAFP00000013990 C2H2 ZF 425 447
ENSLAFP00000013990 C2H2 ZF 453 475
ENSLAFP00000013990 C2H2 ZF 481 503
ENSLAFP00000013990 C2H2 ZF 509 531

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.820
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.817
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.806
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.805
ZNF250 Homo sapiens ENSG00000196150 D 0.805
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.805
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.805
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.804
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.804
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.804
Zfp647 Mus musculus ENSMUSG00000054967 I 0.804
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.804
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.804
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.804
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.804
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.803
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.802
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.802
ZNF250 Sorex araneus ENSSARG00000004999 I 0.801
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.799
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.799
ZNF250 Felis catus ENSFCAG00000013730 I 0.797
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.796
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.796
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.796
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.795
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.795
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.793
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.781
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.779
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.768