CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CTCF
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000009798
T099310_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CTCF
M08238_2.00
Homo sapiens
GCGCCCYCTGSYGGY
RCCRSCAGRGGGCGC
ChIP-seq
Najafabadi et al.(2015b)
CTCF
0.820
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000012827
C2H2 ZF
266
288
FQCELCSYTCPRRSNLDRHMKSH
ENSMMUP00000012827
C2H2 ZF
294
316
HKCHLCGRAFRTVTLLRNHLNTH
ENSMMUP00000012827
C2H2 ZF
380
402
FQCSLCSYASRDTYKLKRHMRTH
ENSMMUP00000012827
C2H2 ZF
408
431
YECYICHARFTQSGTMKMHILQKH
ENSMMUP00000012827
C2H2 ZF
438
461
FHCPHCDTVIARKSDLGVHLRKQH
ENSMMUP00000012827
C2H2 ZF
468
490
KKCRYCDAVFHERYALIQHQKSH
ENSMMUP00000012827
C2H2 ZF
496
518
FKCDQCDYACRQERHMIMHKRTH
ENSMMUP00000012827
C2H2 ZF
524
547
YACSHCDKTFRQKQLLDMHFKRYH
ENSMMUP00000012827
C2H2 ZF
556
576
FVCSKCGKTFTRRNTMARHAD
ENSMMUP00000032364
C2H2 ZF
7
29
HKCHLCGRAFRTVSKLKRHIRSH
ENSMMUP00000032364
C2H2 ZF
35
57
FQCSLCSYASRDTYKLKRHMRTH
ENSMMUP00000032364
C2H2 ZF
63
86
YECYICHARFTQSGTMKMHILQKH
ENSMMUP00000032364
C2H2 ZF
93
116
FHCPHCDTVIARKSDLGVHLRKQH
ENSMMUP00000032364
C2H2 ZF
123
145
KKCRYCDAVFHERYALIQHQKSH
ENSMMUP00000032364
C2H2 ZF
151
173
FKCDQCDYACRQERHMIMHKRTH
ENSMMUP00000032364
C2H2 ZF
179
202
YACSHCDKTFRQKQLLDMHFKRYH
ENSMMUP00000032364
C2H2 ZF
211
231
FVCSKCGKTFTRRNTMARHAD
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ctcf
Dipodomys ordii
ENSDORG00000000111
N
0.827
CTCF
Homo sapiens
ENSG00000102974
D
0.820
CTCF
Sus scrofa
ENSSSCG00000024253
I
0.820
ENSLOCG00000006895
Lepisosteus oculatus
ENSLOCG00000006895
N
0.815