ZNF18 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000027830 T103701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.813 0.974
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.813 0.974
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.813 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000020704 C2H2 ZF 409 430
ENSOGAP00000020704 C2H2 ZF 436 458
ENSOGAP00000020704 C2H2 ZF 464 486
ENSOGAP00000020704 C2H2 ZF 492 514
ENSOGAP00000020704 C2H2 ZF 520 542

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF18 Microcebus murinus ENSMICG00000016196 I 0.825
ZNF18 Oryctolagus cuniculus ENSOCUG00000010095 I 0.823
ENSSTOG00000012652 Ictidomys tridecemlineatus ENSSTOG00000012652 I 0.823
ENSTSYG00000006855 Tarsius syrichta ENSTSYG00000006855 I 0.823
ZNF18 Callithrix jacchus ENSCJAG00000004790 I 0.821
ENSNLEG00000014526 Nomascus leucogenys ENSNLEG00000014526 I 0.821
ENSPPYG00000007992 Pongo abelii ENSPPYG00000007992 I 0.821
ZNF18 Pan troglodytes ENSPTRG00000008782 I 0.821
ZNF18 Tupaia belangeri ENSTBEG00000007103 I 0.816
ENSAMEG00000013156 Ailuropoda melanoleuca ENSAMEG00000013156 I 0.815
ZNF18 Canis familiaris ENSCAFG00000017843 I 0.815
ZNF18 Choloepus hoffmanni ENSCHOG00000001767 I 0.815
ZNF18 Dasypus novemcinctus ENSDNOG00000036895 I 0.815
ZNF18 Equus caballus ENSECAG00000025164 I 0.815
ZNF18 Erinaceus europaeus ENSEEUG00000011943 I 0.815
ENSMPUG00000003670 Mustela putorius furo ENSMPUG00000003670 I 0.815
ZNF18 Pteropus vampyrus ENSPVAG00000014085 I 0.815
ZNF18 Sorex araneus ENSSARG00000003073 I 0.815
ZNF18 Echinops telfairi ENSETEG00000000611 I 0.814
ZNF18 Homo sapiens ENSG00000154957 D 0.813
Zfp18 Rattus norvegicus ENSRNOG00000003981 I 0.810
ENSCSAG00000009126 Chlorocebus sabaeus ENSCSAG00000009126 I 0.809
ENSPANG00000023768 Papio anubis ENSPANG00000023768 I 0.809
ENSP00000391376 Macaca fascicularis ENSP00000391376 I 0.809
Zkscan6 Mus musculus ENSMUSG00000018347 I 0.807
ZNF18 Felis catus ENSFCAG00000027934 I 0.796