CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm4
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000011007
T104873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000013805
C2H2 ZF
513
532
CQCGKECSSFSELKAHLSSH
ENSORLP00000013805
C2H2 ZF
559
581
FKCSMCSRAFITSTKLNMHFMGH
ENSORLP00000013805
C2H2 ZF
587
609
HKCEYCSKAFSDPSNLRMHLKIH
ENSORLP00000013805
C2H2 ZF
615
637
YRCTVCEKLFTQKSHVASHMLIH
ENSORLP00000013805
C2H2 ZF
643
665
LKCDLCDRAFIRKQDLKQHMFSH
ENSORLP00000013805
C2H2 ZF
671
693
IQCPKCNKNFLKTNHLKKHMNSH
ENSORLP00000013805
C2H2 ZF
699
720
FVCEKCHKAFLTKYHLTRHLKI
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000012068
Poecilia formosa
ENSPFOG00000012068
N
0.771
ENSXMAG00000004286
Xiphophorus maculatus
ENSXMAG00000004286
N
0.771