CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:ch211-216l23.1
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000013673
T104909_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000017158
C2H2 ZF
54
76
YPCQFCDKSFSRLSYLKRHEQIH
ENSORLP00000017158
C2H2 ZF
110
132
YSCQECEAAFSRSDHLKIHLKTH
ENSORLP00000017158
C2H2 ZF
138
160
FKCTVCKRGFSSTSSLQSHMQAH
ENSORLP00000017158
C2H2 ZF
189
212
YMCDYCEETFSQTDELEKHVLTRH
ENSORLP00000017158
C2H2 ZF
336
360
YSCPYCSKRDFHSLAVLEIHLKTIH
ENSORLP00000017158
C2H2 ZF
368
391
HTCQLCLETLPTLYNLNEHVRKAH
ENSORLP00000017158
C2H2 ZF
416
439
FHCNYCPDMFGDINSLQEHIRVSH
ENSORLP00000017158
C2H2 ZF
458
481
FFCNQCSMGFLTESSLTEHIQQTH
ENSORLP00000017158
C2H2 ZF
515
540
YSCPYCTNSPIFGSLLKLTKHIKENH
ENSORLP00000017158
C2H2 ZF
589
611
YPCNQCDLRFGSFETFQAHLKSH
ENSORLP00000017158
C2H2 ZF
619
642
QSCPQCSKEDFESQDALLQHLTVH
ENSORLP00000017158
C2H2 ZF
650
673
YVCESCDKQFSSVDDLQKHLLDMH
ENSORLP00000017158
C2H2 ZF
678
701
YHCTLCQEVFDSKVSIQVHLAVKH
ENSORLP00000017158
C2H2 ZF
708
731
FRCTACAWDFRKEADLQLHVKHNH
ENSORLP00000017158
C2H2 ZF
765
788
FTCRFCGKAFHAISLLERHLREKH
ENSORLP00000017158
C2H2 ZF
855
878
YACDICGAAYTMESLLQNHRLRDH
ENSORLP00000017158
C2H2 ZF
901
923
HKCNVCSRTFFSENGLREHAQTH
ENSORLP00000017158
C2H2 ZF
930
952
YMCPICGERFPSLLTLTEHKVTH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSXMAG00000006113
Xiphophorus maculatus
ENSXMAG00000006113
N
0.794
ENSPFOG00000003135
Poecilia formosa
ENSPFOG00000003135
N
0.794
si:ch211-216l23.1
Takifugu rubripes
ENSTRUG00000006180
N
0.784
si:ch211-216l23.1
Gasterosteus aculeatus
ENSGACG00000002626
N
0.763