CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF549
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000011559
T108042_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF549
M07576_2.00
Homo sapiens
KGCTGCCCRRTTCAT
ATGAAYYGGGCAGCM
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF549.RCADE.OriginalMapping
0.825
0.991
ZNF549
M08300_2.00
Homo sapiens
CTGCCCRRTTCAT
ATGAAYYGGGCAG
ChIP-seq
Schmitges et al.(2016)
Q6P9A3.MEME
0.825
0.991
ZNF549
M08883_2.00
Homo sapiens
NKGCTGCCCDRTYSMTGAHW
WDTCAKSRAYHGGGCAGCMN
Misc
Kulakovskiy et al.(2013)
ZN549_HUMAN.H11MO.0.C
0.825
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000016889
C2H2 ZF
222
241
YKCEQVFNEKVHVIEHQRVH
ENSPTRP00000016889
C2H2 ZF
247
269
CKRREYGKSLNSKYLFVEHQRTH
ENSPTRP00000016889
C2H2 ZF
275
298
YVCNICGKSFLHKQTLVGHQQRIH
ENSPTRP00000016889
C2H2 ZF
304
326
YVCIECGKSLSSKYSLVEHQRTH
ENSPTRP00000016889
C2H2 ZF
332
355
YVCNVCGKSFRHKQTFVGHQQRIH
ENSPTRP00000016889
C2H2 ZF
361
383
YVCMECGKSFIHSYDRIRHQRVH
ENSPTRP00000016889
C2H2 ZF
389
411
YQCSECGKSFIYKQSLLDHHRIH
ENSPTRP00000016889
C2H2 ZF
417
439
YECKECGKAFIHKKRLLEHQRIH
ENSPTRP00000016889
C2H2 ZF
445
467
YVCIICGKSFIRSSDYMRHQRIH
ENSPTRP00000016889
C2H2 ZF
473
495
YECSDCGKAFISKQTLLKHHKIH
ENSPTRP00000016889
C2H2 ZF
501
523
YECSECGKGFYLEVKLLQHQRIH
ENSPTRP00000016889
C2H2 ZF
529
551
CECNECGKVFSHQKRLLEHQKVH
ENSPTRP00000016889
C2H2 ZF
557
579
CECSECGKCFRHRTSLIQHQKVH
ENSPTRP00000016889
C2H2 ZF
585
607
YNCTACEKAFIYKNKLVEHQRIH
ENSPTRP00000016889
C2H2 ZF
613
635
YECGKCGKAFNKRYSLVRHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF549
Homo sapiens
ENSG00000121406
D
0.825
ZNF549
Gorilla gorilla
ENSGGOG00000026189
I
0.824
ENSMMUP00000008047
Macaca fascicularis
ENSMMUP00000008047
I
0.805
ZNF549
Macaca mulatta
ENSMMUG00000006121
I
0.805
ENSCSAG00000001631
Chlorocebus sabaeus
ENSCSAG00000001631
I
0.805
ENSPANG00000012181
Papio anubis
ENSPANG00000012181
I
0.801
ENSNLEG00000010976
Nomascus leucogenys
ENSNLEG00000010976
I
0.761