ZNF580 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000004547 T108533_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF580
M04637_2.00 		Homo sapiens
VCTACCCYHNVCTACCCY
RGGGTAGBNDRGGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_eDBD_HT-SELEX 		0.827 1.000
ZNF580
M04639_2.00 		Homo sapiens
VCTACCNYHNNVCTACCNH
DNGGTAGBNNDRNGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_1 		0.827 1.000
ZNF580
M04640_2.00 		Homo sapiens
BRTTATGTTAAATWRTTACCNYN
NRNGGTAAYWATTTAACATAAYV		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_2 		0.827 1.000
ZNF580
M04638_2.00 		Homo sapiens
MCTACCCTHRMCTACCCT
AGGGTAGKYDAGGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_eDBD_Methyl-HT-SELEX 		0.827 1.000
ZNF580
M04641_2.00 		Homo sapiens
MCTACCHYNNNMCTACCHH
DDGGTAGKNNNRDGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_1 		0.827 1.000
ZNF580
M04642_2.00 		Homo sapiens
NRTTATGTTAAATWRTTACCHTN
NADGGTAAYWATTTAACATAAYN		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000004304 C2H2 ZF 92 114
ENSPVAP00000004304 C2H2 ZF 120 142
ENSPVAP00000004304 C2H2 ZF 150 172

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018924 Ailuropoda melanoleuca ENSAMEG00000018924 I 0.827
ZNF580 Canis familiaris ENSCAFG00000028709 I 0.827
ZNF580 Callithrix jacchus ENSCJAG00000017124 I 0.827
ZNF580 Cavia porcellus ENSCPOG00000019582 I 0.827
ZNF580 Dasypus novemcinctus ENSDNOG00000025922 I 0.827
ENSDORG00000003247 Dipodomys ordii ENSDORG00000003247 I 0.827
ZNF580 Homo sapiens ENSG00000213015 D 0.827
ZNF580 Gorilla gorilla ENSGGOG00000028333 I 0.827
ZNF580 Loxodonta africana ENSLAFG00000020757 I 0.827
Zfp580 Mus musculus ENSMUSG00000055633 I 0.827
ZNF580 Otolemur garnettii ENSOGAG00000032491 I 0.827
ZNF580 Procavia capensis ENSPCAG00000014361 I 0.827
ZNF580 Pan troglodytes ENSPTRG00000011521 I 0.827
Zfp580 Rattus norvegicus ENSRNOG00000016274 I 0.827
ENSTTRG00000000983 Tursiops truncatus ENSTTRG00000000983 I 0.827
ZNF580 Bos taurus ENSBTAG00000047508 I 0.811
ENSSTOG00000025235 Ictidomys tridecemlineatus ENSSTOG00000025235 I 0.811
ENSCSAG00000001725 Chlorocebus sabaeus ENSCSAG00000001725 I 0.807
ZNF581 Macaca mulatta ENSMMUG00000004805 I 0.807
ENSP00000320050 Macaca fascicularis ENSP00000320050 I 0.807