CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BNC1
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000003403
T111940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000005990
C2H2 ZF
339
361
ICNACEKTFYDKGTLKIHYNAVH
ENSTNIP00000005990
C2H2 ZF
366
388
HKCTIEGCNMVFSSLRSRNRHSA
ENSTNIP00000005990
C2H2 ZF
860
882
ACHVCQKVYSNKGTFRAHYKTVH
ENSTNIP00000005990
C2H2 ZF
887
914
HKCKVPGCDTSFSSVRSRNRHSQNLNLH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BNC1
Takifugu rubripes
ENSTRUG00000004186
N
0.815
ENSONIG00000003425
Oreochromis niloticus
ENSONIG00000003425
N
0.803
ENSPFOG00000004480
Poecilia formosa
ENSPFOG00000004480
N
0.803
ENSXMAG00000000835
Xiphophorus maculatus
ENSXMAG00000000835
N
0.803
ENSAMXG00000013189
Astyanax mexicanus
ENSAMXG00000013189
N
0.801
BNC1
Danio rerio
ENSDARG00000100757
N
0.798