CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_09524
(
Phytophthora parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
F443_09524
T114256_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra76486
M01182_2.00
Phytophthora ramorum
NRWKCHNN
NNDGMWYN
PBM
Lambert et al.(2019)
pTH11170
0.797
0.890
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI46057
C2H2 ZF
42
64
FQCGECPRQFSRRYALQEHLATH
ETI46057
C2H2 ZF
70
94
YRCPARGCGKRFTTTSNLARHRRLH
ETI46057
C2H2 ZF
101
125
LACPSPGCTKTFTTQHKLQRHVRVH
ETI46057
C2H2 ZF
132
156
RCKFANCSKTFSSTGNLNRHMRNQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora parasitica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITG_01387
Phytophthora infestans
PITG_01387
I
0.817
Physo137937
Phytophthora sojae
Physo137937
I
0.812
HpaG801423
Hyaloperonospora arabidopsidis
HpaG801423
I
0.799
Phyra76486
Phytophthora ramorum
Phyra76486
D
0.797
fgenesh_scip_prom.28083.7632
Phytophthora lateralis
fgenesh_scip_prom.28083.7632
I
0.797
estExt_fgenesh1_kg.C_70642
Phytophthora capsici
estExt_fgenesh1_kg.C_70642
I
0.785
fgenesh_scip_prom.46568.9158
Phytophthora kernoviae
fgenesh_scip_prom.46568.9158
I
0.776