her (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0001185 T114396_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
her
M03662_2.00		 Drosophila melanogaster
DCTCANRAVTGCGTWTWTGAGH
DCTCAWAWACGCABTYNTGAGH		 SELEX
Nitta et al.(2015)
her_1		 (Direct) (Direct)
her
M06045_2.00		 Drosophila melanogaster
DRCTCAHDNHKSCGY
RCGSMDNHDTGAGYH		 B1H
Zhu et al.(2011)
her_SANGER_10_FBgn0001185		 (Direct) (Direct)
her
M06046_2.00		 Drosophila melanogaster
WDCTCAYWDHTGCGY
RCGCADHWRTGAGHW		 B1H
Zhu et al.(2011)
her_SOLEXA_10_FBgn0001185		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0080440 C2H2 ZF 21 45
FBpp0080440 C2H2 ZF 54 77
FBpp0080440 C2H2 ZF 96 120
FBpp0080440 C2H2 ZF 130 153
FBpp0307137 C2H2 ZF 21 45
FBpp0307137 C2H2 ZF 54 77
FBpp0307137 C2H2 ZF 96 120
FBpp0307137 C2H2 ZF 130 153

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GM17191 Drosophila sechellia FBgn0172102 I 0.827
GD24067 Drosophila simulans FBgn0195423 I 0.827