CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

hb *(Drosophila pseudoobscura)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0062741	T114612_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
hb M06041_2.00	Drosophila melanogaster	WTTTTTRN	NYAAAAAW	B1H Zhu et al.(2011) hb_FlyReg_FBgn0001180	0.827	1.000
hb M06042_2.00	Drosophila melanogaster	KKTTTTTTTG	CAAAAAAAMM	B1H Zhu et al.(2011) hb_NAR_FBgn0001180	0.827	1.000
hb M06043_2.00	Drosophila melanogaster	KBBDTTTTTTAHK	MDTAAAAAAHVVM	B1H Zhu et al.(2011) hb_SANGER_2.5_FBgn0001180	0.827	1.000
hb M06044_2.00	Drosophila melanogaster	BBNDTTTTTTR	YAAAAAAHNVV	B1H Zhu et al.(2011) hb_SOLEXA_5_FBgn0001180	0.827	1.000
hb M09660_2.00	Drosophila melanogaster	KTTTTTTRNB	VNYAAAAAAM	Misc Kulakovskiy et al.(2009) hb	0.827	1.000
hb M10370_2.00	Drosophila melanogaster	HTTTTTDBKS	SMVHAAAAAH	Transfac Matys et al.(2006) I$HB_01	0.827	1.000
hb M08450_2.00	Drosophila melanogaster	HTTTTTDBKS	SMVHAAAAAH	COMPILED Mathelier et al.(2014) MA0049.1	0.827	1.000
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0281166	C2H2 ZF	255	277	YKCKTCGVVAITKVDFWAHTRTH
FBpp0281166	C2H2 ZF	284	306	LQCPKCPFVTEFKHHLEYHIRKH
FBpp0281166	C2H2 ZF	312	334	FQCDKCSYTCVNKSMLNSHRKSH
FBpp0281166	C2H2 ZF	340	364	YRCADCDYATKYCHSFKLHLRKYGH
FBpp0281166	C2H2 ZF	742	764	YECKYCDIFFKDAVLYTIHMGYH
FBpp0281166	C2H2 ZF	770	794	FKCNMCGEKCDGPVGLFVHMARNAH

Links
Other C2H2 ZF family TFs
Other *Drosophila pseudoobscura* TFs