GA22020 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0082005 T114773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hkb
M03710_2.00 		Drosophila melanogaster
VTCACGCCYHHN
NDDRGGCGTGAB		 SELEX
Nitta et al.(2015)
hkb_1 		0.823 0.986
hkb
M06470_2.00 		Drosophila melanogaster
TCACGCCYM
KRGGCGTGA		 B1H
Mathelier et al.(2014)
MA0450.1 		0.823 0.986
hkb
M06168_2.00 		Drosophila melanogaster
TCACGCCYM
KRGGCGTGA		 B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204 		0.823 0.986
hkb
M09666_2.00 		Drosophila melanogaster
YMACGCCCMY
RKGGGCGTKR		 Misc
Kulakovskiy et al.(2009)
hkb 		0.823 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284621 C2H2 ZF 190 212
FBpp0284621 C2H2 ZF 218 242
FBpp0284621 C2H2 ZF 248 270

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GH18734 Drosophila grimshawi FBgn0126201 I 0.827
GI22886 Drosophila mojavensis FBgn0145613 I 0.827
GL12325 Drosophila persimilis FBgn0149932 I 0.827
GJ14181 Drosophila virilis FBgn0201398 I 0.827
GK13762 Drosophila willistoni FBgn0215770 I 0.827
GF16814 Drosophila ananassae FBgn0093835 I 0.824
LCUP000702 Lucilia cuprina LCUP000702 I 0.824
MDOA010102 Musca domestica MDOA010102 I 0.824
GG11643 Drosophila erecta FBgn0103940 I 0.823
GM10707 Drosophila sechellia FBgn0165653 I 0.823
GD19684 Drosophila simulans FBgn0191175 I 0.823
GE25358 Drosophila yakuba FBgn0242436 I 0.823
hkb Drosophila melanogaster FBgn0261434 D 0.823
BGIBMGA002238 Bombyx mori BGIBMGA002238 I 0.809
HMEL016959 Heliconius melpomene HMEL016959 I 0.809
KGM_06603 Danaus plexippus KGM_06603 I 0.809
MCINX014717 Melitaea cinxia MCINX014717 I 0.809
CpipJ_CPIJ008311 Culex pipiens CpipJ_CPIJ008311 I 0.804
CPIJ008311 Culex quinquefasciatus CPIJ008311 I 0.804
AAEL014006 Aedes aegypti AAEL014006 I 0.800
ADAC010229 Anopheles darlingi ADAC010229 I 0.800
AGAP004517 Anopheles gambiae AGAP004517 I 0.800
AARA006439 Anopheles arabiensis AARA006439 I 0.800
AATE009845 Anopheles atroparvus AATE009845 I 0.800
ACOM029598 Anopheles coluzzii ACOM029598 I 0.800
ACUA019554 Anopheles culicifacies ACUA019554 I 0.800
AEPI006519 Anopheles epiroticus AEPI006519 I 0.800
AFAF011359 Anopheles farauti AFAF011359 I 0.800
AFUN004445 Anopheles funestus AFUN004445 I 0.800
AMEC013971 Anopheles melas AMEC013971 I 0.800
AMEM010701 Anopheles merus AMEM010701 I 0.800
AMIN004891 Anopheles minimus AMIN004891 I 0.800
AQUA009647 Anopheles quadriannulatus AQUA009647 I 0.800
ASIS018018 Anopheles sinensis ASIS018018 I 0.800
ASTEI04844 Anopheles stephensi ASTEI04844 I 0.800
PPAI000954 Phlebotomus papatasi PPAI000954 I 0.793
TC010992 Tribolium castaneum TC010992 I 0.789
CLEC005464 Cimex lectularius CLEC005464 I 0.789
LDEC017422 Leptinotarsa decemlineata LDEC017422 I 0.789
ACHR005179 Anopheles christyi ACHR005179 I 0.784
PHUM127400 Pediculus humanus PHUM127400 I 0.783
SMAR000785 Strigamia maritima SMAR000785 I 0.780
tetur02g06400 Tetranychus urticae tetur02g06400 I 0.767
DAPPUDRAFT_331337 Daphnia pulex DAPPUDRAFT_331337 I 0.764
tetur02g06440 Tetranychus urticae tetur02g06440 I 0.764
ISCW000054 Ixodes scapularis ISCW000054 I 0.761