CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM16074
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0170990
T116059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG3065
M06134_2.00
Drosophila melanogaster
RCCACGCCCMY
RKGGGCGTGGY
B1H
Zhu et al.(2011)
CG3065_F1-3_SANGER_2.5_FBgn0034946
0.827
1.000
CG3065
M06135_2.00
Drosophila melanogaster
NNRCCACGCCCMCNN
NNGKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-3_SOLEXA_2.5_FBgn0034946
0.827
1.000
CG3065
M06136_2.00
Drosophila melanogaster
NNRCCACGCCCMYH
DRKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-5_SOLEXA_2.5_FBgn0034946
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197551
C2H2 ZF
109
133
FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0197551
C2H2 ZF
139
163
FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0197551
C2H2 ZF
169
191
FECIQCTKKFSRSDHLTKHLATH
FBpp0197551
C2H2 ZF
345
367
FYCRQCEKRFKRQDDLNRHIRTH
FBpp0197551
C2H2 ZF
373
395
YACQQCCRRFVRSDHLKKHQQTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG3065
Drosophila melanogaster
FBgn0034946
D
0.827
GD11817
Drosophila simulans
FBgn0183556
I
0.827
GF12885
Drosophila ananassae
FBgn0089919
I
0.816
GG22915
Drosophila erecta
FBgn0115072
I
0.816
GE14352
Drosophila yakuba
FBgn0231964
I
0.816
GA15902
Drosophila pseudoobscura
FBgn0075918
I
0.814
GL11644
Drosophila persimilis
FBgn0149253
I
0.814
GK15726
Drosophila willistoni
FBgn0217729
I
0.814
GH21701
Drosophila grimshawi
FBgn0129162
I
0.811
GJ19699
Drosophila virilis
FBgn0206841
I
0.811
GI18861
Drosophila mojavensis
FBgn0141600
I
0.801
LCUP013112
Lucilia cuprina
LCUP013112
I
0.788