CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GJ16127
(
Drosophila virilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0203312
T116534_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG3407
M06130_2.00
Drosophila melanogaster
MHGTCAASM
KSTTGACDK
B1H
Zhu et al.(2011)
CG3407_SANGER_2.5_FBgn0031573
0.761
0.862
CG3407
M06131_2.00
Drosophila melanogaster
DWGTCAASHVNNVNNNNNNNNNVVN
NBBNNNNNNNNNBNNBDSTTGACWH
B1H
Zhu et al.(2011)
CG3407_SOLEXA_2.5_FBgn0031573
0.761
0.862
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0230544
C2H2 ZF
587
609
FHCDKCVRDFNSYNALKYHQYTH
FBpp0230544
C2H2 ZF
615
637
FQCASCERSFYTQSALKAHERTH
FBpp0230544
C2H2 ZF
643
666
YKCEKCDFKFRQWGDLKYHIISRH
FBpp0230544
C2H2 ZF
672
694
HMCEYCGKSFSRKYSLVVHRRIH
FBpp0230544
C2H2 ZF
700
722
YACQYCGKTFRASSYLLTHIKVH
FBpp0230544
C2H2 ZF
728
750
YACGVCDKKFRVSGDLKRHTRIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila virilis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG24401
Drosophila erecta
FBgn0116533
I
0.763
CG3407
Drosophila melanogaster
FBgn0031573
D
0.761
GM18118
Drosophila sechellia
FBgn0173025
I
0.761
GD22726
Drosophila simulans
FBgn0194123
I
0.761
GE14791
Drosophila yakuba
FBgn0232383
I
0.759