CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE25643
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0242705
T117107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG4854
M06154_2.00
Drosophila melanogaster
GKDGTTGGCAAC
GTTGCCAACHMC
B1H
Zhu et al.(2011)
CG4854_SANGER_10_FBgn0038766
0.787
0.957
CG4854
M06155_2.00
Drosophila melanogaster
NNBBVNBNNNDBYRGTTGGCAACDH
DHGTTGCCAACYRVHNNNVNBVVNN
B1H
Zhu et al.(2011)
CG4854_SOLEXA_5_FBgn0038766
0.787
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0270653
C2H2 ZF
194
216
FTCHICNNVYSERVKLNNHMKVH
FBpp0270653
C2H2 ZF
222
244
HECEICHKRFRQTPQLARHMNTH
FBpp0270653
C2H2 ZF
250
272
YKCDYCDSRFADPSTRIKHQRIH
FBpp0270653
C2H2 ZF
278
300
YKCKFCSKSFGYSNVLRVHLKTH
FBpp0270653
C2H2 ZF
306
328
FSCQYCQKSFSQLHHKNTHEKSH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GE25642
Drosophila yakuba
FBgn0242704
I
0.827
GG23680
Drosophila erecta
FBgn0115821
I
0.817
GM17690
Drosophila sechellia
FBgn0172598
I
0.803
GD19333
Drosophila simulans
FBgn0190835
I
0.799
CG4854
Drosophila melanogaster
FBgn0038766
D
0.787