CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA22510
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0243913
T117129_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG2052
M03711_2.00
Drosophila melanogaster
WTTTTTHHVNWTTTTTT
AAAAAAWNBDDAAAAAW
SELEX
Nitta et al.(2015)
CG2052_1
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0272512
C2H2 ZF
307
329
HQCQQCMKSFSSNHQLVQHIRVH
FBpp0272512
C2H2 ZF
335
357
YKCSYCDRRFKQLSHVQQHTRLH
FBpp0272512
C2H2 ZF
363
387
YKCHLPDCGRAFIQLSNLQQHLRNH
FBpp0272512
C2H2 ZF
399
420
FHCNICGKGFATESSLRTHTSK
FBpp0272512
C2H2 ZF
541
563
HPCPVCGKHYVNEGSLRKHLACH
FBpp0272512
C2H2 ZF
576
597
WPCSVCQAVFTHENGLLTHMES
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG16450
Drosophila erecta
FBgn0108681
I
0.827
GL18148
Drosophila persimilis
FBgn0155751
I
0.827
GM26782
Drosophila sechellia
FBgn0181635
I
0.827
GE14516
Drosophila yakuba
FBgn0232119
I
0.827
CG2052
Drosophila melanogaster
FBgn0262636
D
0.827
GK13709
Drosophila willistoni
FBgn0215717
I
0.824
GJ18239
Drosophila virilis
FBgn0205401
I
0.821
GI14055
Drosophila mojavensis
FBgn0136809
I
0.819
GH23618
Drosophila grimshawi
FBgn0131075
I
0.817
LLOJ002432
Lutzomyia longipalpis
LLOJ002432
I
0.785
GB41731
Apis mellifera
GB41731
I
0.762