CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.9724
(
Phytophthora lateralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.28083.9724
T117404_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.9724
C2H2 ZF
34
58
FQCPDLRCGRRFNRKYTLTEHMKTH
fgenesh_scip_prom.28083.9724
C2H2 ZF
64
88
HVCRARGCGKRFSTSGNLSRHMRLH
fgenesh_scip_prom.28083.9724
C2H2 ZF
95
118
HCPVKGCTCKFMSDIKLAKHMRSH
fgenesh_scip_prom.28083.9724
C2H2 ZF
124
149
HTCKVPACGKSFSTTGNLNRHLKNQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora lateralis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo128920
Phytophthora sojae
Physo128920
N
0.822
HpaG801336
Hyaloperonospora arabidopsidis
HpaG801336
N
0.821
F443_10159
Phytophthora parasitica
F443_10159
N
0.819
Phyra76419
Phytophthora ramorum
Phyra76419
N
0.815
fgenesh_scip_prom.46568.3727
Phytophthora kernoviae
fgenesh_scip_prom.46568.3727
N
0.801