CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.9725
(
Phytophthora lateralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.28083.9725
T117405_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.9725
C2H2 ZF
32
56
FRCPVDHCERRFNRKYTLSEHLKTH
fgenesh_scip_prom.28083.9725
C2H2 ZF
62
86
HVCRAPGCGRRFATSSNLSRHMRLH
fgenesh_scip_prom.28083.9725
C2H2 ZF
92
116
MRCPRESCSRTFLSDVQLAKHLKQH
fgenesh_scip_prom.28083.9725
C2H2 ZF
122
146
HPCRVAGCTKTFSTTGNLNRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora lateralis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra76418
Phytophthora ramorum
Phyra76418
N
0.827
F443_10158
Phytophthora parasitica
F443_10158
N
0.790
fgenesh1_pm.C_scaffold_2000262
Phytophthora capsici
fgenesh1_pm.C_scaffold_2000262
N
0.778
fgenesh1_pm.C_scaffold_34000006
Phytophthora capsici
fgenesh1_pm.C_scaffold_34000006
N
0.778
Physo128921
Phytophthora sojae
Physo128921
N
0.772