CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G380515
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G380515
T118620_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G380515_P01
C2H2 ZF
126
149
YKCEFCTVVRSKKCLIQAHMVAHH
GRMZM2G380515_P01
C2H2 ZF
172
194
HRCQECGRCFQKPAHLKQHMQSH
GRMZM2G380515_P02
C2H2 ZF
172
194
HRCQECGRCFQKPAHLKQHMQSH
GRMZM2G380515_P02
C2H2 ZF
200
224
FICPLEDCPFSYKRKDHLNRHMLKH
GRMZM2G380515_P02
C2H2 ZF
229
254
FSCTLDGCDMRFSMKADMQRHVKEIH
GRMZM2G380515_P02
C2H2 ZF
262
286
FVCKEDGCNKVFRYSSKLKKHEESH
GRMZM2G380515_P02
C2H2 ZF
352
377
MKCTFDGCEHFFSNKSNLTKHVKACH
GRMZM2G380515_P02
C2H2 ZF
383
404
FKCGIVGCGKAFTYKHVRDNHE
GRMZM2G380515_P04
C2H2 ZF
70
92
HRCQECGRCFQKPAHLKQHMQSH
GRMZM2G380515_P04
C2H2 ZF
98
122
FICPLEDCPFSYKRKDHLNRHMLKH
GRMZM2G380515_P04
C2H2 ZF
127
152
FSCTLDGCDMRFSMKADMQRHVKEIH
GRMZM2G380515_P04
C2H2 ZF
160
184
FVCKEDGCNKVFRYSSKLKKHEESH
GRMZM2G380515_P04
C2H2 ZF
250
275
MKCTFDGCEHFFSNKSNLTKHVKACH
GRMZM2G380515_P04
C2H2 ZF
281
302
FKCGIVGCGKAFTYKHVRDNHE
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB08G11050
Oryza brachyantha
OB08G11050
N
0.793
OS02G0116000
Oryza sativa
OS02G0116000
N
0.783