CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART07G21220
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART07G21220
T124651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART07G21220.1
C2H2 ZF
110
133
FPCHLCHKEFGSRKAVHGHMRVHH
OBART07G21220.1
C2H2 ZF
170
194
YKCKYEGCNMEYKTHQGLGGHVAGH
OBART07G21220.1
C2H2 ZF
216
238
HPCNVCGKEYPTGVALGGHKRKH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA07G0163600
Oryza glaberrima
ORGLA07G0163600
N
0.827
ONIVA07G19900
Oryza nivara
ONIVA07G19900
N
0.827
OGLUM07G21090
Oryza glumaepatula
OGLUM07G21090
N
0.827
BGIOSGA023948
Oryza indica
BGIOSGA023948
N
0.827