CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART11G12140
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART11G12140
T124662_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART11G12140.1
C2H2 ZF
232
256
YMCKMQGCGRAFPTHQGLGGHAAGH
OBART11G12140.1
C2H2 ZF
289
311
HRCRECGMEWKTGFALGGHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA11G0104000
Oryza glaberrima
ORGLA11G0104000
N
0.827
OS11G0442900
Oryza sativa
OS11G0442900
N
0.827
ONIVA11G11690
Oryza nivara
ONIVA11G11690
N
0.827
OLONG_018906
Oryza longistaminata
OLONG_018906
N
0.827
OGLUM11G11840
Oryza glumaepatula
OGLUM11G11840
N
0.827
BGIOSGA036870
Oryza indica
BGIOSGA036870
N
0.827