CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G39910
(
Oryza punctata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OPUNC01G39910
T125004_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G39910.1
C2H2 ZF
1249
1271
YSCDIEGCSMSFRTKRDLSLHKS
OPUNC01G39910.1
C2H2 ZF
1273
1296
ICPVKGCGKKFFSHKYLLQHRKVH
OPUNC01G39910.1
C2H2 ZF
1332
1358
YVCHEPGCAQTFRFVSDFSRHKRKTGH
OPUNC01G39910.2
C2H2 ZF
794
816
YSCDIEGCSMSFRTKRDLSLHKS
OPUNC01G39910.2
C2H2 ZF
818
841
ICPVKGCGKKFFSHKYLLQHRKVH
OPUNC01G39910.2
C2H2 ZF
847
871
LTCPWEGCNMAFKWPWARTEHLRVH
OPUNC01G39910.2
C2H2 ZF
877
903
YVCHEPGCAQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza punctata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005011
Oryza indica
BGIOSGA005011
N
0.827
LPERR01G35650
Leersia perrieri
LPERR01G35650
N
0.827
OBART01G41100
Oryza barthii
OBART01G41100
N
0.827
OGLUM01G45290
Oryza glumaepatula
OGLUM01G45290
N
0.827
OLONG_004128
Oryza longistaminata
OLONG_004128
N
0.827
OMERI01G38090
Oryza meridionalis
OMERI01G38090
N
0.827
ONIVA01G46140
Oryza nivara
ONIVA01G46140
N
0.827
ORGLA01G0350200
Oryza glaberrima
ORGLA01G0350200
N
0.827
ORUFI01G44440
Oryza rufipogon
ORUFI01G44440
N
0.827
JMJ705
Oryza sativa
OS01G0907400
N
0.827
OB01G49820
Oryza brachyantha
OB01G49820
N
0.811