PGTG_04650 (Puccinia graminis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGTG_04650 T125869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PGTG_04650
M01452_2.00		 Puccinia graminis
RHCHGWGCRN
NYGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH10234		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01452_2.00 C2H2 ZF 18 42
M01452_2.00 C2H2 ZF 48 72
M01452_2.00 C2H2 ZF 78 100
M01452_2.00 C2H2 ZF 106 130

DNA Binding Domains

Protein ID Domain From To Sequence
EFP78694 C2H2 ZF 18 42
EFP78694 C2H2 ZF 48 72
EFP78694 C2H2 ZF 78 100
EFP78694 C2H2 ZF 106 130

Links

Other C2H2 ZF family TFs
Other Puccinia graminis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTTG_09215 Puccinia triticina PTTG_09215 I 0.827
MELLADRAFT_117645 Melampsora laricipopulina MELLADRAFT_117645 I 0.804