CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra76300
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra76300
T126272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra76300
C2H2 ZF
34
58
FSCPIPTCGGRFHRKFTLHEHMKTH
Phyra76300
C2H2 ZF
64
88
HQCPVAGCGKRFSTSGNLARHRKLH
Phyra76300
C2H2 ZF
93
117
LNCPTPHCSREFTSREKLMRHLKVH
Phyra76300
C2H2 ZF
123
148
HTCTIEGCGKTFSTAGNLTRHRRTRH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.6792
Phytophthora lateralis
fgenesh_scip_prom.28083.6792
N
0.826
Physo134727
Phytophthora sojae
Physo134727
N
0.813
F443_10781
Phytophthora parasitica
F443_10781
N
0.801
PITG_10767
Phytophthora infestans
PITG_10767
N
0.795
fgenesh_scip_prom.28083.6793
Phytophthora lateralis
fgenesh_scip_prom.28083.6793
N
0.762
Phyra76299
Phytophthora ramorum
Phyra76299
N
0.762
HpaG807951
Hyaloperonospora arabidopsidis
HpaG807951
N
0.759