CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra82539
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra82539
T126287_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra82539
C2H2 ZF
35
59
FECEEPGCGRRFNRKFTLSEHKKTH
Phyra82539
C2H2 ZF
65
89
YVCPLAECSRRFSTSGNLARHKRLH
Phyra82539
C2H2 ZF
95
119
FECDINGCKRSFPSQEKLDHHIKIH
Phyra82539
C2H2 ZF
125
150
HVCRVPGCTKTFSTAGNLTRHIKNRH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.3637
Phytophthora lateralis
fgenesh_scip_prom.28083.3637
N
0.815
F443_02699
Phytophthora parasitica
F443_02699
N
0.803
fgenesh_scip_prom.46568.2416
Phytophthora kernoviae
fgenesh_scip_prom.46568.2416
N
0.803
Physo136974
Phytophthora sojae
Physo136974
N
0.803
PITG_17750
Phytophthora infestans
PITG_17750
N
0.803
estExt_Genewise1Plus.C_160120
Phytophthora capsici
estExt_Genewise1Plus.C_160120
N
0.803
HpaG804479
Hyaloperonospora arabidopsidis
HpaG804479
N
0.773